from the world's big
New CRISPR tools can cut, splice whole chromosomes
Experts are saying it's a "huge step forward for synthetic biology."
- Until recently, the gene-editing tool CRISPR has only been able to make changes within single genes.
- The new tools allow scientists to cut and splice larger chunks of genetic material.
- The findings will likely have major implications for a variety of research fields, and also allow researchers to create synthetic species that can produce molecules not made by natural organisms.
Since 2012, the gene-editing tool CRISPR/Cas9 has enabled scientists to target and modify DNA with remarkable precision. But one constraint of this technique has been that it's only able to make changes within single genes. Now, scientists have developed new tools that allow them to cut and splice large chunks of chromosomes, and to assemble new synthetic genomes from distinct strains.
The findings, published in a paper on August 30 in Science, likely have major implications for fields such as synthetic biology, computational biology, and biological computing, and could lead to better treatments for a wide array of diseases.
"This new paper is incredibly exciting and a huge step forward for synthetic biology," Anne Meyer, a synthetic biologist at the University of Rochester in New York who was not involved in the paper, told Science.
Unlike previous gene-editing tools, the new tools are able to make many precise cuts to long strands of DNA without leaving any scarring.
The researchers, as Robert F. Service wrote for Science, also altered "another well-known tool, an enzyme called lambda red recombinase, so it could glue the ends of the original chromosome—minus the removed portion—back together, as well as fuse the ends of the removed portion. Both circular strands of DNA are protected from endonucleases. The technique can create different circular chromosome pairs in other cells, and researchers can then swap chromosomes at will, eventually inserting whatever chunk they choose into the original genome."
"Now, I can make a series of changes in one segment and then another and combine them together. That's a big deal," Chang Liu, a synthetic biologist at the University of California, Irvine, told Science.
Why CRISPR Gene Editing Gives Its Creator Nightmares
The new tools will likely open the doors for scientists to explore many novel areas: create synthetic species that can produce molecules not made by natural organisms, write information into DNA for use as a storage device, and drive down the costs of medical research by making it easier to edit bacterial genomes on a larger scale.
However, using CRISPR to edit large sections of the human genome is unlikely to occur anytime soon, given the regulatory hurdles and ethical complications. After all, scientists aren't fully aware of the consequences of making small edits to DNA, much less larger cuts.
"We don't always fully understand the changes we're making," Alan Regenberg, a bioethicist at Johns Hopkins Berman Institute of Bioethics, told Science News. "Even if we do make the changes we want to make, there's still question about whether it will do what we want and not do things we don't want."
Construction of the $500 billion dollar tech city-state of the future is moving ahead.
- The futuristic megacity Neom is being built in Saudi Arabia.
- The city will be fully automated, leading in health, education and quality of life.
- It will feature an artificial moon, cloud seeding, robotic gladiators and flying taxis.
The Red Sea area where Neom will be built:
Saudi Arabia Plans Futuristic City, "Neom" (Full Promotional Video)<span style="display:block;position:relative;padding-top:56.25%;" class="rm-shortcode" data-rm-shortcode-id="c646d528d230c1bf66c75422bc4ccf6f"><iframe type="lazy-iframe" data-runner-src="https://www.youtube.com/embed/N53DzL3_BHA?rel=0" width="100%" height="auto" frameborder="0" scrolling="no" style="position:absolute;top:0;left:0;width:100%;height:100%;"></iframe></span>
Frequent shopping for single items adds to our carbon footprint.
- A new study shows e-commerce sites like Amazon leave larger greenhouse gas footprints than retail stores.
- Ordering online from retail stores has an even smaller footprint than going to the store yourself.
- Greening efforts by major e-commerce sites won't curb wasteful consumer habits. Consolidating online orders can make a difference.
A pile of recycled cardboard sits on the ground at Recology's Recycle Central on January 4, 2018 in San Francisco, California.
Photo by Justin Sullivan/Getty Images<p>A large part of the reason is speed. In a competitive market, pure players use the equation, <em>speed + convenience</em>, to drive adoption. This is especially relevant to the "last mile" GHG footprint: the distance between the distribution center and the consumer.</p><p>Interestingly, the smallest GHG footprint occurs when you order directly from a physical store—even smaller than going there yourself. Pure players, such as Amazon, are the greatest offenders. Variables like geographic location matter; the team looked at shopping in the UK, the US, China, and the Netherlands. </p><p>Sadegh Shahmohammadi, a PhD student at the Netherlands' Radboud University and corresponding author of the paper, <a href="https://www.cnn.com/2020/02/26/tech/greenhouse-gas-emissions-retail/index.html" target="_blank">says</a> the above "pattern holds true in countries where people mostly drive. It really depends on the country and consumer behavior there."</p><p>The researchers write that this year-and-a-half long study pushes back on previous research that claims online shopping to be better in terms of GHG footprints.</p><p style="margin-left: 20px;">"They have, however, compared the GHG emissions per shopping event and did not consider the link between the retail channels and the basket size, which leads to a different conclusion than that of the current study."</p><p>Online retail is where convenience trumps environment: people tend to order one item at a time when shopping on pure player sites, whereas they stock up on multiple items when visiting a store. Consumers will sometimes order a number of separate items over the course of a week rather than making one trip to purchase everything they need. </p><p>While greening efforts by online retailers are important, until a shift in consumer attitude changes, the current carbon footprint will be a hard obstacle to overcome. Amazon is trying to have it both ways—carbon-free and convenience addicted—and the math isn't adding up. If you need to order things, do it online, but try to consolidate your purchases as much as possible.</p><p>--</p><p><em>Stay in touch with Derek on <a href="http://www.twitter.com/derekberes" target="_blank">Twitter</a>, <a href="https://www.facebook.com/DerekBeresdotcom" target="_blank">Facebook</a> and <a href="https://derekberes.substack.com/" target="_blank">Substack</a>. His next book is</em> "<em>Hero's Dose: The Case For Psychedelics in Ritual and Therapy."</em></p>
Chronic irregular sleep in children was associated with psychotic experiences in adolescence, according to a recent study out of the University of Birmingham's School of Psychology.